CRAN Package Check Results for Package BTSPAS

Last updated on 2019-12-09 05:47:07 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2020.1.1 10.49 80.86 91.35 OK
r-devel-linux-x86_64-debian-gcc 2020.1.1 8.02 61.92 69.94 OK
r-devel-linux-x86_64-fedora-clang 2020.1.1 106.71 OK
r-devel-linux-x86_64-fedora-gcc 2020.1.1 109.23 OK
r-devel-windows-ix86+x86_64 2020.1.1 26.00 119.00 145.00 OK
r-devel-windows-ix86+x86_64-gcc8 2014.0901 15.00 68.00 83.00 NOTE
r-patched-linux-x86_64 2020.1.1 8.61 72.19 80.80 OK
r-patched-solaris-x86 2020.1.1 152.70 OK
r-release-linux-x86_64 2020.1.1 7.75 73.06 80.81 OK
r-release-windows-ix86+x86_64 2020.1.1 26.00 134.00 160.00 OK
r-release-osx-x86_64 2020.1.1 OK
r-oldrel-windows-ix86+x86_64 2020.1.1 14.00 80.00 94.00 OK
r-oldrel-osx-x86_64 2020.1.1 OK

Check Details

Version: 2014.0901
Check: R code for possible problems
Result: NOTE
    PredictivePosterior.TSPDE: no visible global function definition for
     'rbinom'
    PredictivePosterior.TSPDE: no visible global function definition for
     'dbinom'
    PredictivePosterior.TSPDE.WHCH: no visible global function definition
     for 'rbinom'
    PredictivePosterior.TSPDE.WHCH2: no visible global function definition
     for 'rbinom'
    PredictivePosterior.TSPDE.WHSteel: no visible global function
     definition for 'rbinom'
    PredictivePosterior.TSPNDE : <anonymous> : <anonymous>: no visible
     global function definition for 'dmultinom'
    PredictivePosterior.TSPNDE : <anonymous>: no visible global function
     definition for 'dbinom'
    PredictivePosterior.TSPNDENP : <anonymous> : <anonymous>: no visible
     global function definition for 'dmultinom'
    PredictivePosterior.TSPNDENP : <anonymous>: no visible global function
     definition for 'dbinom'
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for 'split.screen'
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for 'screen'
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for 'par'
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for 'plot'
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for 'abline'
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for 'text'
    PredictivePosteriorPlot.TSPDE: no visible global function definition
     for 'close.screen'
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for 'split.screen'
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for 'screen'
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for 'par'
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for 'plot'
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for 'abline'
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for 'text'
    PredictivePosteriorPlot.TSPDE.WHCH: no visible global function
     definition for 'close.screen'
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for 'split.screen'
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for 'screen'
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for 'par'
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for 'plot'
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for 'abline'
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for 'text'
    PredictivePosteriorPlot.TSPDE.WHCH2: no visible global function
     definition for 'close.screen'
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for 'split.screen'
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for 'screen'
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for 'par'
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for 'plot'
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for 'abline'
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for 'text'
    PredictivePosteriorPlot.TSPDE.WHSteel: no visible global function
     definition for 'close.screen'
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for 'split.screen'
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for 'screen'
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for 'par'
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for 'plot'
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for 'abline'
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for 'text'
    PredictivePosteriorPlot.TSPNDE: no visible global function definition
     for 'close.screen'
    RunTime: no visible global function definition for 'quantile'
    TestIfPool: no visible global function definition for 'chisq.test'
    TimeStratPetersenDiagError: no visible global function definition for
     'var'
    TimeStratPetersenDiagError: no visible global function definition for
     'spline'
    TimeStratPetersenDiagError: no visible global function definition for
     'lm'
    TimeStratPetersenDiagError: no visible global function definition for
     'pdf'
    TimeStratPetersenDiagError: no visible global function definition for
     'plot'
    TimeStratPetersenDiagError: no visible global function definition for
     'lines'
    TimeStratPetersenDiagError: no visible global function definition for
     'dev.off'
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for 'var'
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for 'spline'
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for 'lm'
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for 'pdf'
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for 'plot'
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for 'points'
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for 'lines'
    TimeStratPetersenDiagErrorWHChinook: no visible global function
     definition for 'dev.off'
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for 'var'
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for 'lm'
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for 'pdf'
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for 'plot'
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for 'points'
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for 'lines'
    TimeStratPetersenDiagErrorWHChinook2: no visible global function
     definition for 'dev.off'
    TimeStratPetersenDiagErrorWHChinook2 : init.vals: no visible global
     function definition for 'lm'
    TimeStratPetersenDiagErrorWHChinook2 : init.vals: no visible global
     function definition for 'var'
    TimeStratPetersenDiagErrorWHChinook2 : init.vals: no visible global
     function definition for 'sd'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'var'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'runif'
    TimeStratPetersenDiagErrorWHChinook2_fit : plot_logU: no visible global
     function definition for 'plot'
    TimeStratPetersenDiagErrorWHChinook2_fit : plot_logU: no visible global
     function definition for 'points'
    TimeStratPetersenDiagErrorWHChinook2_fit : plot_logU: no visible global
     function definition for 'lines'
    TimeStratPetersenDiagErrorWHChinook2_fit : plot_logU: no visible global
     function definition for 'segments'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'pdf'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'dev.off'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'split.screen'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'screen'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'par'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'acf'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'close.screen'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'plot'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'density'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible global function
     definition for 'abline'
    TimeStratPetersenDiagErrorWHChinook2_fit: no visible binding for global
     variable 'sd'
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for 'var'
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for 'runif'
    TimeStratPetersenDiagErrorWHChinook_fit : plot_logU: no visible global
     function definition for 'plot'
    TimeStratPetersenDiagErrorWHChinook_fit : plot_logU: no visible global
     function definition for 'points'
    TimeStratPetersenDiagErrorWHChinook_fit : plot_logU: no visible global
     function definition for 'lines'
    TimeStratPetersenDiagErrorWHChinook_fit : plot_logU: no visible global
     function definition for 'segments'
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for 'pdf'
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for 'dev.off'
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for 'acf'
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for 'plot'
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for 'density'
    TimeStratPetersenDiagErrorWHChinook_fit: no visible global function
     definition for 'abline'
    TimeStratPetersenDiagErrorWHChinook_fit: no visible binding for global
     variable 'sd'
    TimeStratPetersenDiagErrorWHSteel: no visible global function
     definition for 'var'
    TimeStratPetersenDiagErrorWHSteel: no visible global function
     definition for 'spline'
    TimeStratPetersenDiagErrorWHSteel: no visible global function
     definition for 'lm'
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for 'var'
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for 'runif'
    TimeStratPetersenDiagErrorWHSteel_fit : plot_logU: no visible global
     function definition for 'plot'
    TimeStratPetersenDiagErrorWHSteel_fit : plot_logU: no visible global
     function definition for 'points'
    TimeStratPetersenDiagErrorWHSteel_fit : plot_logU: no visible global
     function definition for 'lines'
    TimeStratPetersenDiagErrorWHSteel_fit : plot_logU: no visible global
     function definition for 'segments'
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for 'pdf'
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for 'dev.off'
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for 'acf'
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for 'plot'
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for 'density'
    TimeStratPetersenDiagErrorWHSteel_fit: no visible global function
     definition for 'abline'
    TimeStratPetersenDiagErrorWHSteel_fit: no visible binding for global
     variable 'sd'
    TimeStratPetersenDiagError_fit: no visible global function definition
     for 'var'
    TimeStratPetersenDiagError_fit: no visible global function definition
     for 'runif'
    TimeStratPetersenDiagError_fit : plot_logU: no visible global function
     definition for 'plot'
    TimeStratPetersenDiagError_fit : plot_logU: no visible global function
     definition for 'points'
    TimeStratPetersenDiagError_fit : plot_logU: no visible global function
     definition for 'lines'
    TimeStratPetersenDiagError_fit : plot_logU: no visible global function
     definition for 'segments'
    TimeStratPetersenDiagError_fit: no visible global function definition
     for 'pdf'
    TimeStratPetersenDiagError_fit: no visible global function definition
     for 'dev.off'
    TimeStratPetersenDiagError_fit: no visible global function definition
     for 'acf'
    TimeStratPetersenDiagError_fit: no visible global function definition
     for 'plot'
    TimeStratPetersenDiagError_fit: no visible global function definition
     for 'density'
    TimeStratPetersenDiagError_fit: no visible global function definition
     for 'abline'
    TimeStratPetersenDiagError_fit: no visible binding for global variable
     'sd'
    TimeStratPetersenNonDiagError: no visible global function definition
     for 'spline'
    TimeStratPetersenNonDiagError: no visible global function definition
     for 'lm'
    TimeStratPetersenNonDiagError: no visible global function definition
     for 'pdf'
    TimeStratPetersenNonDiagError: no visible global function definition
     for 'plot'
    TimeStratPetersenNonDiagError: no visible global function definition
     for 'lines'
    TimeStratPetersenNonDiagError: no visible global function definition
     for 'dev.off'
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for 'spline'
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for 'lm'
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for 'pdf'
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for 'plot'
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for 'lines'
    TimeStratPetersenNonDiagErrorNP: no visible global function definition
     for 'dev.off'
    TimeStratPetersenNonDiagErrorNPMarkAvail: no visible global function
     definition for 'lm'
    TimeStratPetersenNonDiagErrorNPMarkAvail: no visible global function
     definition for 'pdf'
    TimeStratPetersenNonDiagErrorNPMarkAvail: no visible global function
     definition for 'plot'
    TimeStratPetersenNonDiagErrorNPMarkAvail: no visible global function
     definition for 'lines'
    TimeStratPetersenNonDiagErrorNPMarkAvail: no visible global function
     definition for 'dev.off'
    TimeStratPetersenNonDiagErrorNPMarkAvail : init.vals: no visible global
     function definition for 'lm'
    TimeStratPetersenNonDiagErrorNPMarkAvail : init.vals: no visible global
     function definition for 'var'
    TimeStratPetersenNonDiagErrorNPMarkAvail : init.vals: no visible global
     function definition for 'sd'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for 'runif'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for 'var'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit : plot_logU: no visible
     global function definition for 'plot'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit : plot_logU: no visible
     global function definition for 'points'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit : plot_logU: no visible
     global function definition for 'lines'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit : plot_logU: no visible
     global function definition for 'segments'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for 'pdf'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for 'dev.off'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for 'acf'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for 'plot'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for 'density'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible global
     function definition for 'abline'
    TimeStratPetersenNonDiagErrorNPMarkAvail_fit: no visible binding for
     global variable 'sd'
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for 'runif'
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for 'var'
    TimeStratPetersenNonDiagErrorNP_fit : plot_logU: no visible global
     function definition for 'plot'
    TimeStratPetersenNonDiagErrorNP_fit : plot_logU: no visible global
     function definition for 'points'
    TimeStratPetersenNonDiagErrorNP_fit : plot_logU: no visible global
     function definition for 'lines'
    TimeStratPetersenNonDiagErrorNP_fit : plot_logU: no visible global
     function definition for 'segments'
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for 'pdf'
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for 'dev.off'
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for 'acf'
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for 'plot'
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for 'density'
    TimeStratPetersenNonDiagErrorNP_fit: no visible global function
     definition for 'abline'
    TimeStratPetersenNonDiagErrorNP_fit: no visible binding for global
     variable 'sd'
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for 'runif'
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for 'var'
    TimeStratPetersenNonDiagError_fit : plot_logU: no visible global
     function definition for 'plot'
    TimeStratPetersenNonDiagError_fit : plot_logU: no visible global
     function definition for 'points'
    TimeStratPetersenNonDiagError_fit : plot_logU: no visible global
     function definition for 'lines'
    TimeStratPetersenNonDiagError_fit : plot_logU: no visible global
     function definition for 'segments'
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for 'pdf'
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for 'dev.off'
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for 'acf'
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for 'plot'
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for 'density'
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for 'abline'
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for 'lines'
    TimeStratPetersenNonDiagError_fit: no visible global function
     definition for 'segments'
    TimeStratPetersenNonDiagError_fit: no visible binding for global
     variable 'sd'
    TimeToTargetRunSize: no visible global function definition for 'approx'
    TimeToTargetRunSize: no visible global function definition for 'median'
    TimeToTargetRunSize: no visible global function definition for 'sd'
    TimeToTargetRunSize: no visible global function definition for
     'quantile'
    TimeToTargetRunSize: no visible global function definition for 'pdf'
    TimeToTargetRunSize: no visible global function definition for
     'density'
    TimeToTargetRunSize: no visible global function definition for 'plot'
    TimeToTargetRunSize: no visible global function definition for 'text'
    TimeToTargetRunSize: no visible global function definition for
     'dev.off'
    genInitValsChain : <anonymous>: no visible global function definition
     for 'pnorm'
    genInitValsChain: no visible global function definition for 'lm'
    genInitValsChain: no visible global function definition for 'var'
    genInitValsChain: no visible global function definition for 'sd'
    genInitValsChain: no visible global function definition for 'rnorm'
    genInitValsChain: no visible global function definition for 'median'
    genInitsTTln: no visible global function definition for 'var'
    genInitsTTnp: no visible global function definition for 'sd'
    lnTheta : <anonymous>: no visible global function definition for
     'pnorm'
    run.jags : <anonymous>: no visible global function definition for
     'runif'
    run.jags : <anonymous>: no visible global function definition for
     'write.table'
    run.openbugs: no visible global function definition for 'flush.console'
    simTSPNDE : <anonymous>: no visible global function definition for
     'rmultinom'
    simTSPNDE: no visible global function definition for 'rbinom'
    trace_plot: no visible global function definition for 'split.screen'
    trace_plot: no visible global function definition for 'par'
    trace_plot: no visible global function definition for 'screen'
    trace_plot: no visible global function definition for 'matplot'
    trace_plot: no visible global function definition for 'text'
    trace_plot: no visible global function definition for 'close.screen'
    visualize.muTT.prior: no visible global function definition for 'rnorm'
    visualize.muTT.prior: no visible global function definition for 'stack'
    visualize.muTT.prior: no visible global function definition for
     'boxplot'
    Undefined global functions or variables:
     abline acf approx boxplot chisq.test close.screen dbinom density
     dev.off dmultinom flush.console lines lm matplot median par pdf plot
     pnorm points quantile rbinom rmultinom rnorm runif screen sd segments
     spline split.screen stack text var write.table
    Consider adding
     importFrom("grDevices", "dev.off", "pdf")
     importFrom("graphics", "abline", "boxplot", "close.screen", "lines",
     "matplot", "par", "plot", "points", "screen", "segments",
     "split.screen", "text")
     importFrom("stats", "acf", "approx", "chisq.test", "dbinom", "density",
     "dmultinom", "lm", "median", "pnorm", "quantile", "rbinom",
     "rmultinom", "rnorm", "runif", "sd", "spline", "var")
     importFrom("utils", "flush.console", "stack", "write.table")
    to your NAMESPACE file.
Flavor: r-devel-windows-ix86+x86_64-gcc8