CRAN Package Check Results for Package CNVRG

Last updated on 2020-12-02 05:48:01 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2 167.24 90.29 257.53 NOTE
r-devel-linux-x86_64-debian-gcc 0.2 109.05 73.18 182.23 NOTE
r-devel-linux-x86_64-fedora-clang 0.2 306.23 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2 305.00 NOTE
r-devel-windows-ix86+x86_64 0.2 293.00 201.00 494.00 NOTE
r-patched-linux-x86_64 0.2 93.44 91.49 184.93 NOTE
r-patched-solaris-x86 0.2 322.20 NOTE
r-release-linux-x86_64 0.2 95.13 93.56 188.69 NOTE
r-release-macos-x86_64 0.2 NOTE
r-release-windows-ix86+x86_64 0.2 230.00 161.00 391.00 NOTE
r-oldrel-macos-x86_64 0.2 ERROR
r-oldrel-windows-ix86+x86_64 0.2 246.00 201.00 447.00 NOTE

Check Details

Version: 0.2
Check: for GNU extensions in Makefiles
Result: NOTE
    GNU make is a SystemRequirements.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2
Check: installed package size
Result: NOTE
     installed size is 33.3Mb
     sub-directories of 1Mb or more:
     libs 33.1Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.2
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘rstantools’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.2
Check: examples
Result: ERROR
    Running examples in ‘CNVRG-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: cnvrg_VI
    > ### Title: Perform variational inference sampling
    > ### Aliases: cnvrg_VI
    >
    > ### ** Examples
    >
    > #simulate an OTU table
    > com_demo <-matrix(0, nrow = 10, ncol = 10)
    > com_demo[1:5,] <- c(rep(3,5), rep(7,5)) #Alternates 3 and 7
    > com_demo[6:10,] <- c(rep(7,5), rep(3,5)) #Reverses alternation
    > fornames <- NA
    > for(i in 1:length(com_demo[1,])){
    + fornames[i] <- paste("otu_", i, sep = "")
    + }
    > sample_vec <- NA
    > for(i in 1:length(com_demo[,1])){
    + sample_vec[i] <- paste("sample", i, sep = "_")
    + }
    > com_demo <- data.frame(sample_vec, com_demo)
    > names(com_demo) <- c("sample", fornames)
    >
    > cnvrg_VI(com_demo,starts = c(1,6), ends=c(5,10))
    Chain 1: ------------------------------------------------------------
    Chain 1: EXPERIMENTAL ALGORITHM:
    Chain 1: This procedure has not been thoroughly tested and may be unstable
    Chain 1: or buggy. The interface is subject to change.
    Chain 1: ------------------------------------------------------------
    Chain 1:
    Chain 1:
    Chain 1: empty_nested() must be true before calling recover_memory()
    Error in sampler$call_sampler(c(args, dotlist)) :
     empty_nested() must be true before calling recover_memory()
    Calls: cnvrg_VI ... <Anonymous> -> <Anonymous> -> .local -> <Anonymous> -> .External
    Execution halted
Flavor: r-oldrel-macos-x86_64