CRAN Package Check Results for Package FateID

Last updated on 2019-09-18 05:46:58 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.8 11.48 181.96 193.44 OK
r-devel-linux-x86_64-debian-gcc 0.1.8 9.59 143.74 153.33 OK
r-devel-linux-x86_64-fedora-clang 0.1.8 303.45 NOTE
r-devel-linux-x86_64-fedora-gcc 0.1.8 338.29 OK
r-devel-windows-ix86+x86_64 0.1.8 51.00 310.00 361.00 OK
r-patched-linux-x86_64 0.1.8 11.22 180.53 191.75 OK
r-patched-solaris-x86 0.1.8 418.90 NOTE
r-release-linux-x86_64 0.1.8 11.58 182.99 194.57 OK
r-release-windows-ix86+x86_64 0.1.8 28.00 205.00 233.00 OK
r-release-osx-x86_64 0.1.8 WARN
r-oldrel-windows-ix86+x86_64 0.1.8 27.00 202.00 229.00 OK
r-oldrel-osx-x86_64 0.1.8 WARN

Check Details

Version: 0.1.8
Check: installed package size
Result: NOTE
     installed size is 5.0Mb
     sub-directories of 1Mb or more:
     doc 4.4Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-patched-solaris-x86

Version: 0.1.8
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: 'DESeq2', 'destiny'
Flavor: r-release-osx-x86_64

Version: 0.1.8
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.8
Check: dependencies in R code
Result: NOTE
    No protocol specified
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.8
Check: S3 generic/method consistency
Result: WARN
    No protocol specified
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.8
Check: replacement functions
Result: WARN
    No protocol specified
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.8
Check: foreign function calls
Result: NOTE
    No protocol specified
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.8
Check: R code for possible problems
Result: NOTE
    No protocol specified
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.8
Check: for missing documentation entries
Result: WARN
    No protocol specified
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.8
Check: for code/documentation mismatches
Result: WARN
    No protocol specified
    No protocol specified
    No protocol specified
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.8
Check: Rd \usage sections
Result: NOTE
    No protocol specified
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.1.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘FateID.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    No protocol specified
    Quitting from lines 141-142 (FateID.Rmd)
    Error: processing vignette 'FateID.Rmd' failed with diagnostics:
    there is no package called 'destiny'
    --- failed re-building ‘FateID.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘FateID.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64