CRAN Package Check Results for Package spartan

Last updated on 2019-12-14 05:47:45 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 3.0.2 11.03 123.77 134.80 NOTE
r-devel-linux-x86_64-debian-gcc 3.0.2 8.87 93.53 102.40 NOTE
r-devel-linux-x86_64-fedora-clang 3.0.2 161.78 NOTE
r-devel-linux-x86_64-fedora-gcc 3.0.2 162.92 NOTE
r-devel-windows-ix86+x86_64 3.0.2 21.00 189.00 210.00 OK
r-devel-windows-ix86+x86_64-gcc8 3.0.2 22.00 180.00 202.00 OK
r-patched-linux-x86_64 3.0.2 10.45 111.40 121.85 OK
r-patched-solaris-x86 3.0.2 181.50 NOTE
r-release-linux-x86_64 3.0.2 9.95 112.38 122.33 OK
r-release-windows-ix86+x86_64 3.0.2 18.00 124.00 142.00 OK
r-release-osx-x86_64 3.0.2 NOTE
r-oldrel-windows-ix86+x86_64 3.0.2 16.00 156.00 172.00 ERROR
r-oldrel-osx-x86_64 3.0.2 NOTE

Additional issues

noLD

Check Details

Version: 3.0.2
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'Built_Emulation_RF_GLM.Rda' 'Ensemble_Testing_Velocity.pdf'
     'GLM_TestSet_Velocity.pdf' 'GLM_TrainingSet_Velocity.pdf'
     'RF_TestSet_Velocity.pdf' 'RF_TrainingSet_Velocity.pdf'
     'built_ensemble.Rda' 'partitioned_data.Rda'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 3.0.2
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘gplots’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 3.0.2
Check: tests
Result: ERROR
     Running 'testthat.R' [72s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > Sys.setenv("R_TESTS"="")
     > library(testthat)
     > library(spartan)
     Loading required package: randomForest
     randomForest 4.6-14
     Type rfNews() to see new features/changes/bug fixes.
     Loading required package: e1071
     > options(warn = 2)
     > test_check("spartan", report="summary")
     Test of Spartan Consistency Analysis: ..S.........................................................................................
     Test of A-Test calculation utilities: ..........
     Test of Spartan eFAST Analysis: .........................................................................................................................................trying URL 'http://www.kieranalden.info/spartan/test_data/netlogo_efast.zip'
     Content type 'application/zip' length 505212 bytes (493 KB)
     ==============================
     downloaded 300 KB
    
     1..
     Test of Spartan eFAST Sampling: ......
     Test of Spartan Netlogo eFAST Sampling: S
     Test of Spartan Emulation Sensitivity Analysis: SS
     Testing Spartan Utilities Class: .
     Test of Spartan Evolution Utilities: SS.......
     Test of Error Checking of Spartan Function Arguments: .............................................................................................................................
     Test of Spartan LHC Analysis: .....................................................................................................
     Testing Spartan LHC Plotting Utilities Class: ................................................................
     Test of Spartan Latin-Hypercube Sampling: .....S............
     Test of Spartan Netlogo Latin-Hypercube Sampling: SS
     Test Neural Network Utilities: SSSSSSSSSS
     Test of Spartan Robustness Analysis: ..................................................................................
     Test of Spartan Robustness Sampling: ........S
     Testing Spartan Utilities Class: ....................................
    
     == Skipped =====================================================================
     1. read_simulation_results (@test_aleatory_analysis.R#19) - Reason: On CRAN
    
     2. efast_generate_sample_netlogo (@test_efast_sampling_netlogo.R#7) - Reason: On CRAN
    
     3. emulate_efast_sampled_parameters (@test_emulation_sensitivity_analysis.R#6) - Reason: On CRAN
    
     4. emulate_lhc_sampled_parameters (@test_emulation_sensitivity_analysis.R#42) - Reason: On CRAN
    
     5. emulator_parameter_evolution (@test_evolution.R#6) - Reason: On CRAN
    
     6. nsga2_set_user_params (@test_evolution.R#40) - Reason: On CRAN
    
     7. sample_parameter_space (@test_lhc_sampling.R#17) - Reason: On CRAN
    
     8. process_netlogo_parameter_range_info (@test_lhc_sampling_netlogo.R#6) - Reason: On CRAN
    
     9. lhc_generate_lhc_sample_netlogo (@test_lhc_sampling_netlogo.R#21) - Reason: On CRAN
    
     10. determine_optimal_neural_network_structure (@test_neural_network_utilities.R#7) - Reason: On CRAN
    
     11. kfoldCrossValidation (@test_neural_network_utilities.R#32) - Reason: On CRAN
    
     12. analysenetwork_structures (@test_neural_network_utilities.R#55) - Reason: On CRAN
    
     13. createAndEvaluateFolds (@test_neural_network_utilities.R#81) - Reason: On CRAN
    
     14. updateErrorForStructure (@test_neural_network_utilities.R#107) - Reason: On CRAN
    
     15. select_suitable_structure (@test_neural_network_utilities.R#137) - Reason: On CRAN
    
     16. calculate_fold_MSE (@test_neural_network_utilities.R#154) - Reason: On CRAN
    
     17. createTrainingFold (@test_neural_network_utilities.R#190) - Reason: On CRAN
    
     18. createTestFold (@test_neural_network_utilities.R#213) - Reason: On CRAN
    
     19. create_neural_network (@test_neural_network_utilities.R#236) - Reason: On CRAN
    
     20. oat_generate_netlogo_behaviour_space_XML (@test_robustness_sampling.R#56) - Reason: On CRAN
    
     == Failed ======================================================================
     -- 1. Error: efast_process_netlogo_result (@test_efast_analysis.R#426) --------
     (converted from warning) downloaded length 307200 != reported length 505212
    
     == DONE ========================================================================
     Error: Test failures
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64