Data preprocessing

Loading the raw dataset from the package¹.

library(netdiffuseR)

## 
## Attaching package: 'netdiffuseR'

## The following object is masked from 'package:base':
## 
##     %*%

data(medInnovations)

Now that we have the data in R, we can start working with it, in particular, we want to do the following things:

• Create a unique id for each individual in the network.
• Remove unsurveyed individuals (we don’t have additional covariates for them).
• Reshaping the data to long format (so we can use it as a panel), and furthermore, as an edgelist.

# Creating unique ids (including for the network data)
othervars <- c("id", "toa", "city")
netvars <- names(medInnovations)[grepl("^net", names(medInnovations))]
for (i in c("id", netvars))
  medInnovations[[i]] <- medInnovations[[i]] + medInnovations$city*1000

# Leaving unsurveyed individuals with NA
surveyed <- medInnovations$id
for (i in netvars)
  medInnovations[[i]][which(!(medInnovations[[i]] %in% surveyed))] <- NA

# Reshaping data (so we have an edgelist)
medInnovations.long <- reshape(
  medInnovations[,c(othervars, netvars)], v.names= "net",
  varying = netvars,
  timevar = "level", idvar="id", direction="long")

Once we have the data in long format, we can coerce it into an diffnet object. This is done by reading the edgelist, obtaining the times of adoption vector and applying the as_diffnet function.

# Coersing the edgelist to an adjacency matrix. Here we are assuming that the
# network is constant through time.
graph <- with(
  medInnovations.long,
  edgelist_to_adjmat(cbind(id, net), t=18,undirected=FALSE, keep.isolates = TRUE)
)

Notice that we have included keep.isolates=TRUE, so, if any element of our edgelist had an NA, NULL or related value, it would still be included in the adjacency matrix. This is specially important if, for example, there are isolated nodes in the data, as if we had not set keep.isolates=TRUE those would had been discarded.

Now we can create our diffnet object. Notice that medInnovations happens to be sorted in the same way as the elements in the adjacency matrix. You can check this by accessing the rownames and sorting medInnovations in that order.

# Just to be sure. Sorting the data!
orddata <- as.numeric(as.factor(rownames(graph[[1]])))
medInnovations <- medInnovations[orddata,]

# Creating a diffnet object
diffnet <- as_diffnet(graph, medInnovations$toa, 
                      vertex.static.attrs = subset(medInnovations, select=c(-id, -toa)))

## Warning in new_diffnet(graph, ...): Coercing -toa- into integer.

Methods

Once a diffnet object, we can apply the usual generic R functions:

plot(diffnet, t=diffnet$meta$nper)

diffnet

## Dynamic network of class -diffnet-
##  Name               : Diffusion Network
##  Behavior           : Unspecified
##  # of nodes         : 125 (1001, 1002, 1003, 1004, 1005, 1006, 1007, 1008, ...)
##  # of time periods  : 18 (1 - 18)
##  Type               : directed
##  Final prevalence   : 1.00
##  Static attributes  : city, detail, meet, coll, attend, proage, length, ... (58)
##  Dynamic attributes : -

summary(diffnet)

## Diffusion network summary statistics
## Name     : Diffusion Network
## Behavior : Unspecified
## -----------------------------------------------------------------------------
##  Period   Adopters   Cum Adopt. (%)   Hazard Rate   Density   Moran's I (sd)  
## -------- ---------- ---------------- ------------- --------- ---------------- 
##        1         11        11 (0.09)             -      0.02  0.07 (0.03) **  
##        2          9        20 (0.16)          0.08      0.02  0.04 (0.03)     
##        3          9        29 (0.23)          0.09      0.02 -0.03 (0.03)     
##        4         11        40 (0.32)          0.11      0.02 -0.02 (0.03)     
##        5         11        51 (0.41)          0.13      0.02 -0.06 (0.03)     
##        6         11        62 (0.50)          0.15      0.02 -0.02 (0.03)     
##        7         13        75 (0.60)          0.21      0.02 -0.00 (0.03)     
##        8          7        82 (0.66)          0.14      0.02  0.01 (0.03)     
##        9          4        86 (0.69)          0.09      0.02  0.01 (0.03)     
##       10          1        87 (0.70)          0.03      0.02  0.01 (0.03)     
##       11          5        92 (0.74)          0.13      0.02  0.02 (0.03)     
##       12          3        95 (0.76)          0.09      0.02  0.02 (0.03)     
##       13          3        98 (0.78)          0.10      0.02  0.01 (0.03)     
##       14          4       102 (0.82)          0.15      0.02  0.04 (0.03)     
##       15          4       106 (0.85)          0.17      0.02  0.05 (0.03) *   
##       16          2       108 (0.86)          0.11      0.02  0.03 (0.03)     
##       17          1       109 (0.87)          0.06      0.02  0.02 (0.03)     
##       18         16       125 (1.00)          1.00      0.02               -  
## -----------------------------------------------------------------------------
##  Left censoring  : 0.09 (11)
##  Right centoring : 0.00 (0)
##  # of nodes      : 125
## 
##  Moran's I was computed on contemporaneous autocorrelation using 1/geodesic
##  values. Significane levels  *** <= .01, ** <= .05, * <= .1.

And the ones included in the package:

plot_diffnet(diffnet, slices=c(1,4,8,12,16,18))

plot_threshold(diffnet, undirected = FALSE, vertex.size = 1/5)

plot_adopters(diffnet)

plot_hazard(diffnet)

Statistical test

Now, we want to know if the threshold model fits here. In order to do so we will use the structure dependency test built in the package, struct_test. We will apply this both in a aggregated level and by city. First we need to subset the data:

# Get cities ids so we can subset the vertices and run the test by city.
city <- diffnet$vertex.static.attrs[,"city"]

# Subsetting diffnet, notice that we can use either indices or ids to create a
# "subdiffnet". In this case we are using indices.
diffnet_city1 <- diffnet[which(city==1),]
diffnet_city2 <- diffnet[which(city==2),]
diffnet_city3 <- diffnet[which(city==3),]
diffnet_city4 <- diffnet[which(city==4),]

Notice that by subsetting the set of vertices we have created 4 new diffnet objects, so all the methods and functions work for each one of these, for example, threshold levels in each city

oldpar <- par(no.readonly = TRUE)
par(mfrow=c(2,2))
plot_threshold(diffnet_city1, vertex.label = "", main="Threshold and ToA\nin City 1")
plot_threshold(diffnet_city2, vertex.label = "", main="Threshold and ToA\nin City 2")
plot_threshold(diffnet_city3, vertex.label = "", main="Threshold and ToA\nin City 3")
plot_threshold(diffnet_city4, vertex.label = "", main="Threshold and ToA\nin City 4")

par(oldpar)

plot_infectsuscep(diffnet_city1, K=5, logscale = TRUE, bins=30)

## Warning in plot_infectsuscep.list(graph$graph, graph$toa, t0, normalize, : When
## applying logscale some observations are missing.

Now we run the test for each city. Observe that we can use the parallel package to speedup the test as we will do in the first two cities using two cores (this is done thanks to the boot package).

# Defining the statistic
avgthr <- function(x) mean(threshold(x), na.rm = TRUE)

# Running the test by city
test1   <- struct_test(diffnet_city1, avgthr, 500, ncpus=2, parallel="multicore")

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

test2   <- struct_test(diffnet_city2, avgthr, 500, ncpus=2, parallel="multicore")

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

test3   <- struct_test(diffnet_city3, avgthr, 500)

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

test4   <- struct_test(diffnet_city4, avgthr, 500)

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph will be
## treated as a baseline, and thus, networks after T=1 will be replaced with T-1.

## Warning in (function (graph, p, algorithm = "endpoints", both.ends = FALSE, :
## The option -copy.first- is set to TRUE. In this case, the first graph wi