netgsa: Network-Based Gene Set Analysis

Carry out Network-based Gene Set Analysis by incorporating external information about interactions among genes, as well as novel interactions learned from data.

Version: 3.1.0
Depends: R (≥ 3.2.1)
Imports: graph, graphite, corpcor, dplyr, glmnet, glassoFast, igraph, Matrix, msigdbr, quadprog, rlang, magrittr
Suggests: knitr, MASS, rmarkdown
Published: 2019-03-27
Author: Jing Ma, Ali Shojaie and Kun Yue
Maintainer: Jing Ma <jingma at fredhutch.org>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/drjingma/netgsa
NeedsCompilation: no
CRAN checks: netgsa results

Downloads:

Reference manual: netgsa.pdf
Vignettes: netgsa
Package source: netgsa_3.1.0.tar.gz
Windows binaries: r-devel: netgsa_3.1.0.zip, r-release: netgsa_3.1.0.zip, r-oldrel: netgsa_3.1.0.zip
OS X binaries: r-release: not available, r-oldrel: netgsa_3.0.tgz
Old sources: netgsa archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=netgsa to link to this page.