Contains functionalities for importing and managing downloaded genome annotation data from 'Ensembl' genome browser (European Bioinformatics Institute, <https://www.ensembl.org>) and from 'UCSC' genome browser (University of California, Santa Cruz, <https://genome.ucsc.edu/>) and annotation routines for genomic positions and splice site positions.
| Version: | 1.7.7 |
| Depends: | methods, doBy, RSQLite |
| Imports: | DBI |
| Published: | 2019-05-22 |
| Author: | Wolfgang Kaisers [aut, cre] |
| Maintainer: | Wolfgang Kaisers <wolfgang.kaisers at gmail.com> |
| License: | GPL-2 |
| NeedsCompilation: | yes |
| Materials: | NEWS ChangeLog |
| CRAN checks: | refGenome results |
| Reference manual: | refGenome.pdf |
| Vignettes: |
readGTF Introduction |
| Package source: | refGenome_1.7.7.tar.gz |
| Windows binaries: | r-devel: refGenome_1.7.7.zip, r-release: refGenome_1.7.7.zip, r-oldrel: refGenome_1.7.7.zip |
| OS X binaries: | r-release: refGenome_1.7.7.tgz, r-oldrel: refGenome_1.7.7.tgz |
| Old sources: | refGenome archive |
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