Last updated on 2019-08-21 05:46:56 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.5 | 44.57 | 372.77 | 417.34 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.5 | 42.15 | 294.32 | 336.47 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.5 | 527.22 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.5 | 525.60 | OK | |||
| r-devel-windows-ix86+x86_64 | 1.0.5 | 118.00 | 639.00 | 757.00 | OK | |
| r-patched-linux-x86_64 | 1.0.5 | 43.36 | 358.62 | 401.98 | OK | |
| r-patched-solaris-x86 | 1.0.5 | 4.30 | ERROR | --no-vignettes | ||
| r-release-linux-x86_64 | 1.0.5 | 42.24 | 357.42 | 399.66 | OK | |
| r-release-windows-ix86+x86_64 | 1.0.5 | 82.00 | 487.00 | 569.00 | OK | |
| r-release-osx-x86_64 | 1.0.5 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 1.0.5 | 104.00 | 559.00 | 663.00 | OK | |
| r-oldrel-osx-x86_64 | 1.0.5 | WARN |
Version: 1.0.5
Flags: --no-vignettes
Check: package dependencies
Result: ERROR
Package required but not available: ‘gdsfmt’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-patched-solaris-x86
Version: 1.0.5
Check: package dependencies
Result: ERROR
Packages required but not available:
'gdsfmt', 'AnnotationDbi', 'GenomeInfoDb'
Packages suggested but not available for checking:
'TxDb.Hsapiens.UCSC.hg19.knownGene', 'org.Hs.eg.db'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-release-osx-x86_64
Version: 1.0.5
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘TxDb.Hsapiens.UCSC.hg19.knownGene’
Flavor: r-oldrel-osx-x86_64
Version: 1.0.5
Check: re-building of vignette outputs
Result: WARN
Error in re-building vignettes:
...
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Loading required package: SKAT
Loading required package: pedgene
Loading required package: Matrix
Loading required package: CompQuadForm
Loading required package: survey
Loading required package: grid
Loading required package: survival
Attaching package: 'survey'
The following object is masked from 'package:graphics':
dotchart
Loading required package: kinship2
Loading required package: quadprog
Loading required package: gdsfmt
Quitting from lines 694-696 (mega2rtutorial.Rmd)
Error: processing vignette 'mega2rtutorial.Rmd' failed with diagnostics:
there is no package called 'TxDb.Hsapiens.UCSC.hg19.knownGene'
Execution halted
Flavor: r-oldrel-osx-x86_64