CRAN Package Check Results for Package MonoPhy

Last updated on 2020-02-27 05:48:52 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2 11.80 103.87 115.67 ERROR
r-devel-linux-x86_64-debian-gcc 1.2 8.47 81.99 90.46 ERROR
r-devel-linux-x86_64-fedora-clang 1.2 146.06 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2 138.69 NOTE
r-devel-windows-ix86+x86_64 1.2 30.00 114.00 144.00 OK
r-devel-windows-ix86+x86_64-gcc8 1.2 26.00 115.00 141.00 OK
r-patched-linux-x86_64 1.2 10.38 91.27 101.65 OK
r-patched-solaris-x86 1.2 199.60 OK
r-release-linux-x86_64 1.2 10.56 90.89 101.45 OK
r-release-windows-ix86+x86_64 1.2 18.00 104.00 122.00 OK
r-release-osx-x86_64 1.2 OK
r-oldrel-windows-ix86+x86_64 1.2 13.00 103.00 116.00 OK
r-oldrel-osx-x86_64 1.2 OK

Check Details

Version: 1.2
Check: tests
Result: ERROR
     Running 'testthat.R' [5s/7s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > test_check("MonoPhy")
     Loading required package: MonoPhy
     Loading required package: ape
     Loading required package: phytools
     Loading required package: maps
     Loading required package: phangorn
     Loading required package: RColorBrewer
     Loading required package: taxize
     -- 1. Failure: Regular solution is accurate (@test_solutions.R#11) ------------
     ...[] not equal to 32.
     1/1 mismatches
     [1] NA - 32 == NA
    
     -- 2. Failure: Regular solution is accurate (@test_solutions.R#12) ------------
     ...[] not equal to 9.
     1/1 mismatches
     [1] NA - 9 == NA
    
     -- 3. Failure: Regular solution is accurate (@test_solutions.R#13) ------------
     ...[] not equal to 6.
     1/1 mismatches
     [1] NA - 6 == NA
    
     -- 4. Failure: Regular solution is accurate (@test_solutions.R#14) ------------
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     -- 5. Failure: Regular solution is accurate (@test_solutions.R#15) ------------
     ...[] not equal to 7.
     1/1 mismatches
     [1] NA - 7 == NA
    
     -- 6. Failure: Regular solution is accurate (@test_solutions.R#16) ------------
     ...[] not equal to 1.
     1/1 mismatches
     [1] NA - 1 == NA
    
     -- 7. Failure: Regular solution is accurate (@test_solutions.R#17) ------------
     ...[] not equal to 77.
     1/1 mismatches
     [1] NA - 77 == NA
    
     -- 8. Failure: Regular solution is accurate (@test_solutions.R#18) ------------
     ...[] not equal to 25.
     1/1 mismatches
     [1] NA - 25 == NA
    
     -- 9. Failure: Regular solution is accurate (@test_solutions.R#19) ------------
     ...[] not equal to 35.
     1/1 mismatches
     [1] NA - 35 == NA
    
     -- 10. Failure: Regular solution is accurate (@test_solutions.R#20) -----------
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     -- 11. Failure: Regular solution is accurate (@test_solutions.R#21) -----------
     ...[] not equal to 11.
     1/1 mismatches
     [1] NA - 11 == NA
    
     -- 12. Failure: Regular solution is accurate (@test_solutions.R#22) -----------
     ...[] not equal to 2.
     1/1 mismatches
     [1] NA - 2 == NA
    
     -- 13. Failure: Multifurcating solution1 is accurate (@test_solutions.R#48) ---
     ...[] not equal to 32.
     1/1 mismatches
     [1] NA - 32 == NA
    
     -- 14. Failure: Multifurcating solution1 is accurate (@test_solutions.R#49) ---
     ...[] not equal to 8.
     1/1 mismatches
     [1] NA - 8 == NA
    
     -- 15. Failure: Multifurcating solution1 is accurate (@test_solutions.R#50) ---
     ...[] not equal to 7.
     1/1 mismatches
     [1] NA - 7 == NA
    
     -- 16. Failure: Multifurcating solution1 is accurate (@test_solutions.R#51) ---
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     -- 17. Failure: Multifurcating solution1 is accurate (@test_solutions.R#52) ---
     ...[] not equal to 25.
     1/1 mismatches
     [1] NA - 25 == NA
    
     -- 18. Failure: Multifurcating solution1 is accurate (@test_solutions.R#53) ---
     ...[] not equal to 0.
     1/1 mismatches
     [1] NA - 0 == NA
    
     -- 19. Failure: Multifurcating solution1 is accurate (@test_solutions.R#54) ---
     ...[] not equal to 77.
     1/1 mismatches
     [1] NA - 77 == NA
    
     -- 20. Failure: Multifurcating solution1 is accurate (@test_solutions.R#55) ---
     ...[] not equal to 23.
     1/1 mismatches
     [1] NA - 23 == NA
    
     -- 21. Failure: Multifurcating solution1 is accurate (@test_solutions.R#56) ---
     ...[] not equal to 37.
     1/1 mismatches
     [1] NA - 37 == NA
    
     -- 22. Failure: Multifurcating solution1 is accurate (@test_solutions.R#57) ---
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     -- 23. Failure: Multifurcating solution1 is accurate (@test_solutions.R#58) ---
     ...[] not equal to 47.
     1/1 mismatches
     [1] NA - 47 == NA
    
     -- 24. Failure: Multifurcating solution1 is accurate (@test_solutions.R#59) ---
     ...[] not equal to 0.
     1/1 mismatches
     [1] NA - 0 == NA
    
     -- 25. Failure: Multifurcating solution2 is accurate (@test_solutions.R#85) ---
     ...[] not equal to 32.
     1/1 mismatches
     [1] NA - 32 == NA
    
     -- 26. Failure: Multifurcating solution2 is accurate (@test_solutions.R#86) ---
     ...[] not equal to 9.
     1/1 mismatches
     [1] NA - 9 == NA
    
     -- 27. Failure: Multifurcating solution2 is accurate (@test_solutions.R#87) ---
     ...[] not equal to 6.
     1/1 mismatches
     [1] NA - 6 == NA
    
     -- 28. Failure: Multifurcating solution2 is accurate (@test_solutions.R#88) ---
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     -- 29. Failure: Multifurcating solution2 is accurate (@test_solutions.R#89) ---
     ...[] not equal to 7.
     1/1 mismatches
     [1] NA - 7 == NA
    
     -- 30. Failure: Multifurcating solution2 is accurate (@test_solutions.R#90) ---
     ...[] not equal to 1.
     1/1 mismatches
     [1] NA - 1 == NA
    
     -- 31. Failure: Multifurcating solution2 is accurate (@test_solutions.R#91) ---
     ...[] not equal to 77.
     1/1 mismatches
     [1] NA - 77 == NA
    
     -- 32. Failure: Multifurcating solution2 is accurate (@test_solutions.R#92) ---
     ...[] not equal to 25.
     1/1 mismatches
     [1] NA - 25 == NA
    
     -- 33. Failure: Multifurcating solution2 is accurate (@test_solutions.R#93) ---
     ...[] not equal to 35.
     1/1 mismatches
     [1] NA - 35 == NA
    
     -- 34. Failure: Multifurcating solution2 is accurate (@test_solutions.R#94) ---
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     -- 35. Failure: Multifurcating solution2 is accurate (@test_solutions.R#95) ---
     ...[] not equal to 11.
     1/1 mismatches
     [1] NA - 11 == NA
    
     -- 36. Failure: Multifurcating solution2 is accurate (@test_solutions.R#96) ---
     ...[] not equal to 2.
     1/1 mismatches
     [1] NA - 2 == NA
    
     -- 37. Failure: Multifurcating solution3 is accurate (@test_solutions.R#122) --
     ...[] not equal to 32.
     1/1 mismatches
     [1] NA - 32 == NA
    
     -- 38. Failure: Multifurcating solution3 is accurate (@test_solutions.R#123) --
     ...[] not equal to 7.
     1/1 mismatches
     [1] NA - 7 == NA
    
     -- 39. Failure: Multifurcating solution3 is accurate (@test_solutions.R#124) --
     ...[] not equal to 8.
     1/1 mismatches
     [1] NA - 8 == NA
    
     -- 40. Failure: Multifurcating solution3 is accurate (@test_solutions.R#125) --
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     -- 41. Failure: Multifurcating solution3 is accurate (@test_solutions.R#126) --
     ...[] not equal to 15.
     1/1 mismatches
     [1] NA - 15 == NA
    
     -- 42. Failure: Multifurcating solution3 is accurate (@test_solutions.R#127) --
     ...[] not equal to 1.
     1/1 mismatches
     [1] NA - 1 == NA
    
     -- 43. Failure: Multifurcating solution3 is accurate (@test_solutions.R#128) --
     ...[] not equal to 77.
     1/1 mismatches
     [1] NA - 77 == NA
    
     -- 44. Failure: Multifurcating solution3 is accurate (@test_solutions.R#129) --
     ...[] not equal to 20.
     1/1 mismatches
     [1] NA - 20 == NA
    
     -- 45. Failure: Multifurcating solution3 is accurate (@test_solutions.R#130) --
     ...[] not equal to 40.
     1/1 mismatches
     [1] NA - 40 == NA
    
     -- 46. Failure: Multifurcating solution3 is accurate (@test_solutions.R#131) --
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     -- 47. Failure: Multifurcating solution3 is accurate (@test_solutions.R#132) --
     ...[] not equal to 35.
     1/1 mismatches
     [1] NA - 35 == NA
    
     -- 48. Failure: Multifurcating solution3 is accurate (@test_solutions.R#133) --
     ...[] not equal to 2.
     1/1 mismatches
     [1] NA - 2 == NA
    
     == testthat results ===========================================================
     [ OK: 48 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 48 ]
     1. Failure: Regular solution is accurate (@test_solutions.R#11)
     2. Failure: Regular solution is accurate (@test_solutions.R#12)
     3. Failure: Regular solution is accurate (@test_solutions.R#13)
     4. Failure: Regular solution is accurate (@test_solutions.R#14)
     5. Failure: Regular solution is accurate (@test_solutions.R#15)
     6. Failure: Regular solution is accurate (@test_solutions.R#16)
     7. Failure: Regular solution is accurate (@test_solutions.R#17)
     8. Failure: Regular solution is accurate (@test_solutions.R#18)
     9. Failure: Regular solution is accurate (@test_solutions.R#19)
     1. ...
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.2
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'MonoTaxplot.pdf' 'Taxplot.pdf'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.2
Check: tests
Result: ERROR
     Running ‘testthat.R’ [4s/7s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > test_check("MonoPhy")
     Loading required package: MonoPhy
     Loading required package: ape
     Loading required package: phytools
     Loading required package: maps
     Loading required package: phangorn
     Loading required package: RColorBrewer
     Loading required package: taxize
     ── 1. Failure: Regular solution is accurate (@test_solutions.R#11) ────────────
     ...[] not equal to 32.
     1/1 mismatches
     [1] NA - 32 == NA
    
     ── 2. Failure: Regular solution is accurate (@test_solutions.R#12) ────────────
     ...[] not equal to 9.
     1/1 mismatches
     [1] NA - 9 == NA
    
     ── 3. Failure: Regular solution is accurate (@test_solutions.R#13) ────────────
     ...[] not equal to 6.
     1/1 mismatches
     [1] NA - 6 == NA
    
     ── 4. Failure: Regular solution is accurate (@test_solutions.R#14) ────────────
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     ── 5. Failure: Regular solution is accurate (@test_solutions.R#15) ────────────
     ...[] not equal to 7.
     1/1 mismatches
     [1] NA - 7 == NA
    
     ── 6. Failure: Regular solution is accurate (@test_solutions.R#16) ────────────
     ...[] not equal to 1.
     1/1 mismatches
     [1] NA - 1 == NA
    
     ── 7. Failure: Regular solution is accurate (@test_solutions.R#17) ────────────
     ...[] not equal to 77.
     1/1 mismatches
     [1] NA - 77 == NA
    
     ── 8. Failure: Regular solution is accurate (@test_solutions.R#18) ────────────
     ...[] not equal to 25.
     1/1 mismatches
     [1] NA - 25 == NA
    
     ── 9. Failure: Regular solution is accurate (@test_solutions.R#19) ────────────
     ...[] not equal to 35.
     1/1 mismatches
     [1] NA - 35 == NA
    
     ── 10. Failure: Regular solution is accurate (@test_solutions.R#20) ───────────
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     ── 11. Failure: Regular solution is accurate (@test_solutions.R#21) ───────────
     ...[] not equal to 11.
     1/1 mismatches
     [1] NA - 11 == NA
    
     ── 12. Failure: Regular solution is accurate (@test_solutions.R#22) ───────────
     ...[] not equal to 2.
     1/1 mismatches
     [1] NA - 2 == NA
    
     ── 13. Failure: Multifurcating solution1 is accurate (@test_solutions.R#48) ───
     ...[] not equal to 32.
     1/1 mismatches
     [1] NA - 32 == NA
    
     ── 14. Failure: Multifurcating solution1 is accurate (@test_solutions.R#49) ───
     ...[] not equal to 8.
     1/1 mismatches
     [1] NA - 8 == NA
    
     ── 15. Failure: Multifurcating solution1 is accurate (@test_solutions.R#50) ───
     ...[] not equal to 7.
     1/1 mismatches
     [1] NA - 7 == NA
    
     ── 16. Failure: Multifurcating solution1 is accurate (@test_solutions.R#51) ───
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     ── 17. Failure: Multifurcating solution1 is accurate (@test_solutions.R#52) ───
     ...[] not equal to 25.
     1/1 mismatches
     [1] NA - 25 == NA
    
     ── 18. Failure: Multifurcating solution1 is accurate (@test_solutions.R#53) ───
     ...[] not equal to 0.
     1/1 mismatches
     [1] NA - 0 == NA
    
     ── 19. Failure: Multifurcating solution1 is accurate (@test_solutions.R#54) ───
     ...[] not equal to 77.
     1/1 mismatches
     [1] NA - 77 == NA
    
     ── 20. Failure: Multifurcating solution1 is accurate (@test_solutions.R#55) ───
     ...[] not equal to 23.
     1/1 mismatches
     [1] NA - 23 == NA
    
     ── 21. Failure: Multifurcating solution1 is accurate (@test_solutions.R#56) ───
     ...[] not equal to 37.
     1/1 mismatches
     [1] NA - 37 == NA
    
     ── 22. Failure: Multifurcating solution1 is accurate (@test_solutions.R#57) ───
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     ── 23. Failure: Multifurcating solution1 is accurate (@test_solutions.R#58) ───
     ...[] not equal to 47.
     1/1 mismatches
     [1] NA - 47 == NA
    
     ── 24. Failure: Multifurcating solution1 is accurate (@test_solutions.R#59) ───
     ...[] not equal to 0.
     1/1 mismatches
     [1] NA - 0 == NA
    
     ── 25. Failure: Multifurcating solution2 is accurate (@test_solutions.R#85) ───
     ...[] not equal to 32.
     1/1 mismatches
     [1] NA - 32 == NA
    
     ── 26. Failure: Multifurcating solution2 is accurate (@test_solutions.R#86) ───
     ...[] not equal to 9.
     1/1 mismatches
     [1] NA - 9 == NA
    
     ── 27. Failure: Multifurcating solution2 is accurate (@test_solutions.R#87) ───
     ...[] not equal to 6.
     1/1 mismatches
     [1] NA - 6 == NA
    
     ── 28. Failure: Multifurcating solution2 is accurate (@test_solutions.R#88) ───
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     ── 29. Failure: Multifurcating solution2 is accurate (@test_solutions.R#89) ───
     ...[] not equal to 7.
     1/1 mismatches
     [1] NA - 7 == NA
    
     ── 30. Failure: Multifurcating solution2 is accurate (@test_solutions.R#90) ───
     ...[] not equal to 1.
     1/1 mismatches
     [1] NA - 1 == NA
    
     ── 31. Failure: Multifurcating solution2 is accurate (@test_solutions.R#91) ───
     ...[] not equal to 77.
     1/1 mismatches
     [1] NA - 77 == NA
    
     ── 32. Failure: Multifurcating solution2 is accurate (@test_solutions.R#92) ───
     ...[] not equal to 25.
     1/1 mismatches
     [1] NA - 25 == NA
    
     ── 33. Failure: Multifurcating solution2 is accurate (@test_solutions.R#93) ───
     ...[] not equal to 35.
     1/1 mismatches
     [1] NA - 35 == NA
    
     ── 34. Failure: Multifurcating solution2 is accurate (@test_solutions.R#94) ───
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     ── 35. Failure: Multifurcating solution2 is accurate (@test_solutions.R#95) ───
     ...[] not equal to 11.
     1/1 mismatches
     [1] NA - 11 == NA
    
     ── 36. Failure: Multifurcating solution2 is accurate (@test_solutions.R#96) ───
     ...[] not equal to 2.
     1/1 mismatches
     [1] NA - 2 == NA
    
     ── 37. Failure: Multifurcating solution3 is accurate (@test_solutions.R#122) ──
     ...[] not equal to 32.
     1/1 mismatches
     [1] NA - 32 == NA
    
     ── 38. Failure: Multifurcating solution3 is accurate (@test_solutions.R#123) ──
     ...[] not equal to 7.
     1/1 mismatches
     [1] NA - 7 == NA
    
     ── 39. Failure: Multifurcating solution3 is accurate (@test_solutions.R#124) ──
     ...[] not equal to 8.
     1/1 mismatches
     [1] NA - 8 == NA
    
     ── 40. Failure: Multifurcating solution3 is accurate (@test_solutions.R#125) ──
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     ── 41. Failure: Multifurcating solution3 is accurate (@test_solutions.R#126) ──
     ...[] not equal to 15.
     1/1 mismatches
     [1] NA - 15 == NA
    
     ── 42. Failure: Multifurcating solution3 is accurate (@test_solutions.R#127) ──
     ...[] not equal to 1.
     1/1 mismatches
     [1] NA - 1 == NA
    
     ── 43. Failure: Multifurcating solution3 is accurate (@test_solutions.R#128) ──
     ...[] not equal to 77.
     1/1 mismatches
     [1] NA - 77 == NA
    
     ── 44. Failure: Multifurcating solution3 is accurate (@test_solutions.R#129) ──
     ...[] not equal to 20.
     1/1 mismatches
     [1] NA - 20 == NA
    
     ── 45. Failure: Multifurcating solution3 is accurate (@test_solutions.R#130) ──
     ...[] not equal to 40.
     1/1 mismatches
     [1] NA - 40 == NA
    
     ── 46. Failure: Multifurcating solution3 is accurate (@test_solutions.R#131) ──
     ...[] not equal to 17.
     1/1 mismatches
     [1] NA - 17 == NA
    
     ── 47. Failure: Multifurcating solution3 is accurate (@test_solutions.R#132) ──
     ...[] not equal to 35.
     1/1 mismatches
     [1] NA - 35 == NA
    
     ── 48. Failure: Multifurcating solution3 is accurate (@test_solutions.R#133) ──
     ...[] not equal to 2.
     1/1 mismatches
     [1] NA - 2 == NA
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 48 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 48 ]
     1. Failure: Regular solution is accurate (@test_solutions.R#11)
     2. Failure: Regular solution is accurate (@test_solutions.R#12)
     3. Failure: Regular solution is accurate (@test_solutions.R#13)
     4. Failure: Regular solution is accurate (@test_solutions.R#14)
     5. Failure: Regular solution is accurate (@test_solutions.R#15)
     6. Failure: Regular solution is accurate (@test_solutions.R#16)
     7. Failure: Regular solution is accurate (@test_solutions.R#17)
     8. Failure: Regular solution is accurate (@test_solutions.R#18)
     9. Failure: Regular solution is accurate (@test_solutions.R#19)
     1. ...
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc