CRAN Package Check Results for Package SeqFeatR

Last updated on 2019-12-15 05:47:54 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.1 39.82 236.46 276.28 NOTE
r-devel-linux-x86_64-debian-gcc 0.3.1 32.17 182.79 214.96 NOTE
r-devel-linux-x86_64-fedora-clang 0.3.1 361.03 NOTE
r-devel-linux-x86_64-fedora-gcc 0.3.1 329.33 NOTE
r-devel-windows-ix86+x86_64 0.3.1 49.00 346.00 395.00 OK
r-devel-windows-ix86+x86_64-gcc8 0.3.1 48.00 290.00 338.00 OK
r-patched-linux-x86_64 0.3.1 34.53 211.33 245.86 OK
r-patched-solaris-x86 0.3.1 469.00 OK
r-release-linux-x86_64 0.3.1 35.11 211.51 246.62 OK
r-release-windows-ix86+x86_64 0.3.1 43.00 197.00 240.00 OK
r-release-osx-x86_64 0.3.1 WARN
r-oldrel-windows-ix86+x86_64 0.3.1 40.00 186.00 226.00 WARN
r-oldrel-osx-x86_64 0.3.1 OK

Check Details

Version: 0.3.1
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'assocpointpair_result.csv' 'foundereffectfinder_result.csv'
     'getfreqs_result.csv' 'getfreqs_result.png' 'orPlot.pdf1_1.pdf'
     'orPlot.pdf2_1.pdf' 'orPlot.pdf3_1.pdf' 'orPlot.pdf4_1.pdf'
     'orPlot.pdf5_1.pdf' 'orPlot.pdf6_1.pdf' 'orPlot.pdf7_1.pdf'
     'orPlot.pdf8_1.pdf' 'q-values_result.csv' 'rewritetuple_result.csv'
     'tartan_plot.pdf' 'vispair_plot.pdf' 'vispairfeat_plot.pdf'
     'volcano_plot.pdf'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.3.1
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: package ‘S4Vectors’ was built under R version 3.6.1
     Warning: package ‘IRanges’ was built under R version 3.6.1
Flavor: r-release-osx-x86_64

Version: 0.3.1
Check: dependencies in R code
Result: NOTE
    No protocol specified
    No protocol specified
    No protocol specified
Flavor: r-release-osx-x86_64

Version: 0.3.1
Check: S3 generic/method consistency
Result: WARN
    No protocol specified
    No protocol specified
    No protocol specified
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64

Version: 0.3.1
Check: replacement functions
Result: WARN
    No protocol specified
    No protocol specified
    No protocol specified
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavor: r-release-osx-x86_64

Version: 0.3.1
Check: foreign function calls
Result: NOTE
    No protocol specified
    No protocol specified
    No protocol specified
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64

Version: 0.3.1
Check: R code for possible problems
Result: NOTE
    No protocol specified
    No protocol specified
    No protocol specified
Flavor: r-release-osx-x86_64

Version: 0.3.1
Check: for missing documentation entries
Result: WARN
    No protocol specified
    No protocol specified
    No protocol specified
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64

Version: 0.3.1
Check: for code/documentation mismatches
Result: WARN
    No protocol specified
    No protocol specified
    No protocol specified
    No protocol specified
    No protocol specified
    No protocol specified
    No protocol specified
    No protocol specified
    No protocol specified
Flavor: r-release-osx-x86_64

Version: 0.3.1
Check: Rd \usage sections
Result: NOTE
    No protocol specified
    No protocol specified
    No protocol specified
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-release-osx-x86_64

Version: 0.3.1
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: S3 methods '[.fun_list', '[.grouped_df', 'all.equal.tbl_df', 'anti_join.data.frame', 'anti_join.tbl_df', 'arrange.data.frame', 'arrange.default', 'arrange.grouped_df', 'arrange.tbl_df', 'arrange_.data.frame', 'arrange_.tbl_df', 'as.data.frame.grouped_df', 'as.data.frame.rowwise_df', 'as.data.frame.tbl_cube', 'as.table.tbl_cube', 'as.tbl.data.frame', 'as.tbl.tbl', 'as.tbl_cube.array', 'as.tbl_cube.data.frame', 'as.tbl_cube.matrix', 'as.tbl_cube.table', 'as_tibble.grouped_df', 'as_tibble.tbl_cube', 'auto_copy.tbl_cube', 'auto_copy.tbl_df', 'cbind.grouped_df', 'collapse.data.frame', 'collect.data.frame', 'common_by.NULL', 'common_by.character', 'common_by.default', 'common_by.list', 'compute.data.frame', 'copy_to.DBIConnection', 'copy_to.src_local', 'default_missing.data.frame', 'default_missing.default', 'dim.tbl_cube', 'distinct.data.frame', 'distinct.default', 'distinct.grouped_df', 'distinct.tbl_df', 'distinct_.data.frame', 'distinct_.grouped_df', 'distinct_.tbl_df', 'do.NULL', 'do.da [... truncated]
Flavor: r-oldrel-windows-ix86+x86_64