Last updated on 2023-10-01 06:53:19 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.5.0 | 7.58 | 84.51 | 92.09 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.5.0 | 5.07 | 56.54 | 61.61 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.5.0 | 99.47 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.5.0 | 112.14 | ERROR | |||
| r-devel-windows-x86_64 | 0.5.0 | 7.00 | 84.00 | 91.00 | ERROR | |
| r-patched-linux-x86_64 | 0.5.0 | 5.50 | 76.27 | 81.77 | OK | |
| r-release-linux-x86_64 | 0.5.0 | 4.15 | 78.14 | 82.29 | OK | |
| r-release-macos-arm64 | 0.5.0 | 48.00 | OK | |||
| r-release-macos-x86_64 | 0.5.0 | 74.00 | OK | |||
| r-release-windows-x86_64 | 0.5.0 | 8.00 | 97.00 | 105.00 | OK | |
| r-oldrel-macos-arm64 | 0.5.0 | 35.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.5.0 | 62.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.5.0 | 8.00 | 102.00 | 110.00 | OK |
Version: 0.5.0
Check: examples
Result: ERROR
Running examples in ‘sdcLog-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: sdc_descriptives
> ### Title: Disclosure control for descriptive statistics
> ### Aliases: sdc_descriptives
>
> ### ** Examples
>
> sdc_descriptives(
+ data = sdc_descriptives_DT,
+ id_var = "id",
+ val_var = "val_1"
+ )
Error in `[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), :
'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Calls: sdc_descriptives -> check_dominance -> [ -> [.data.table
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.5.0
Check: tests
Result: ERROR
Running ‘spelling.R’ [0s/1s]
Running ‘testthat.R’ [9s/16s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(sdcLog)
>
> test_check("sdcLog")
> 1 + 1
[1] 2
> sdc_log(script_2, conn, append = TRUE)
Log file for 'script_2.R' written to 'file connection'.
[ FAIL 17 | WARN 5 | SKIP 0 | PASS 170 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-sdc_descriptives.R:26:3'): sdc_descriptives works in simple cases ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_descriptives.R:26:2
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_descriptives(sdc_descriptives_DT, "id", "val_1")
5. └─sdcLog:::check_dominance(data, id_var, val_var, by)
6. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
7. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:181:3'): zeros are handles correctly ────────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-sdc_descriptives.R:181:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─testthat::expect_equal(...)
8. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
9. │ └─rlang::eval_bare(expr, quo_get_env(quo))
10. └─sdcLog::sdc_descriptives(sdc_descriptives_DT, "id", "val_2")
11. └─sdcLog:::check_dominance(data, id_var, val_var, by)
12. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
13. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:314:3'): missing ID's are handled correctly (simple case) ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-sdc_descriptives.R:314:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─testthat::expect_equal(...)
8. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
9. │ └─rlang::eval_bare(expr, quo_get_env(quo))
10. └─sdcLog::sdc_descriptives(DT_filled[seq(2, 20, 2)], "id_na", "val_1")
11. └─sdcLog:::check_dominance(data, id_var, val_var, by)
12. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
13. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:493:3'): #77 is fixed ───────────────────────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::capture_warnings(...) at test-sdc_descriptives.R:493:2
2. │ └─base::withCallingHandlers(...)
3. ├─testthat::expect_equal(...)
4. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
5. │ └─rlang::eval_bare(expr, quo_get_env(quo))
6. └─sdcLog::sdc_descriptives(df, "id", val_var = "val")
7. └─sdcLog:::check_dominance(data, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:33:5'): sdc_min_max() works in simple case ───────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:33:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(...)
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:58:5'): sdc_min_max() produces no result in case of sd_overlap due to dominance ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_extreme.R:58:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:84:5'): sdc_min_max() produces no result in case of sd_overlap ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:84:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_3")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:254:5'): sdc_min_max() does not enter an infinite loop ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:254:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt[1:5], "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Failure ('test-sdc_log.R:27:5'): sdc_log() works correctly with log files ───
readLines(tf)[-exclude] (`actual`) not identical to gsub("✓", "v", readLines(log))[-exclude] (`expected`).
actual[2:4] vs expected[2:28]
""
"> data(\"sdc_descriptives_DT\")"
""
"> sdc_descriptives(data = sdc_descriptives_DT, id_var = \"id\", val_var = \"val_1\")"
+ "-------------------------------------------------- SDC results (descriptives) --"
+ "OPTIONS: sdc.n_ids: 5 | sdc.n_ids_dominance: 2 | sdc.share_dominance: 0.85"
+ "SETTINGS: id_var: id | val_var: val_1 | zero_as_NA: FALSE"
+ "--------------------------------------------------------------------------------"
+ ""
+ "> data(\"sdc_min_max_DT\")"
+ ""
and 17 more ...
── Failure ('test-sdc_log.R:28:5'): sdc_log() works correctly with log files ───
readLines\(tf\)\[exclude\] does not match "Output complies to RDC rules.".
Actual values:
* <NA>
* <NA>
Backtrace:
▆
1. └─testthat::expect_match(readLines(tf)[exclude], "Output complies to RDC rules.") at test-sdc_log.R:28:4
2. └─testthat:::expect_match_(...)
── Failure ('test-sdc_log.R:46:5'): sdc_log() works correctly with connections ──
readLines(tf_conn)[-exclude] (`actual`) not identical to gsub("✓", "v", readLines(log))[-exclude] (`expected`).
actual[2:4] vs expected[2:28]
""
"> data(\"sdc_descriptives_DT\")"
""
"> sdc_descriptives(data = sdc_descriptives_DT, id_var = \"id\", val_var = \"val_1\")"
+ "-------------------------------------------------- SDC results (descriptives) --"
+ "OPTIONS: sdc.n_ids: 5 | sdc.n_ids_dominance: 2 | sdc.share_dominance: 0.85"
+ "SETTINGS: id_var: id | val_var: val_1 | zero_as_NA: FALSE"
+ "--------------------------------------------------------------------------------"
+ ""
+ "> data(\"sdc_min_max_DT\")"
+ ""
and 17 more ...
── Failure ('test-sdc_log.R:47:5'): sdc_log() works correctly with connections ──
readLines\(tf_conn\)\[exclude\] does not match "Output complies to RDC rules.".
Actual values:
* <NA>
* <NA>
Backtrace:
▆
1. └─testthat::expect_match(readLines(tf_conn)[exclude], "Output complies to RDC rules.") at test-sdc_log.R:47:4
2. └─testthat:::expect_match_(...)
── Error ('test-sdc_min_max.R:33:5'): sdc_min_max() works in simple case ───────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:33:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(...)
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:58:5'): sdc_min_max() produces no result in case of sd_overlap due to dominance ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_min_max.R:58:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:84:5'): sdc_min_max() produces no result in case of sd_overlap ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:84:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_3")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:261:5'): sdc_min_max() does not enter an infinite loop ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:261:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt[1:5], "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:287:5'): argument fill_id_var works ──────────────
Error in ``[.data.table`(data, i = !is.na(get(id_var)) & !is.na(get(val_var)),
j = list(distinct_ids = data.table::uniqueN(get(id_var))),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:287:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id_na", val_var = "val_1")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_distinct_ids(SD, id_var, val_var, by)
8. ├─...[]
9. └─data.table:::`[.data.table`(...)
[ FAIL 17 | WARN 5 | SKIP 0 | PASS 170 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.5.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘FAQ.Rmd’ using rmarkdown
--- finished re-building ‘FAQ.Rmd’
--- re-building ‘intro.Rmd’ using rmarkdown
Quitting from lines 115-116 [descriptives_simple] (intro.Rmd)
Error: processing vignette 'intro.Rmd' failed with diagnostics:
'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
--- failed re-building ‘intro.Rmd’
--- re-building ‘options.Rmd’ using rmarkdown
Quitting from lines 52-53 [example1_sdc.n_ids] (options.Rmd)
Error: processing vignette 'options.Rmd' failed with diagnostics:
'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
--- failed re-building ‘options.Rmd’
SUMMARY: processing the following files failed:
‘intro.Rmd’ ‘options.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.5.0
Check: examples
Result: ERROR
Running examples in ‘sdcLog-Ex.R’ failed
The error most likely occurred in:
> ### Name: sdc_descriptives
> ### Title: Disclosure control for descriptive statistics
> ### Aliases: sdc_descriptives
>
> ### ** Examples
>
> sdc_descriptives(
+ data = sdc_descriptives_DT,
+ id_var = "id",
+ val_var = "val_1"
+ )
Error in `[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), :
'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Calls: sdc_descriptives -> check_dominance -> [ -> [.data.table
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64
Version: 0.5.0
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [15s/21s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(sdcLog)
>
> test_check("sdcLog")
> 1 + 1
[1] 2
> sdc_log(script_2, conn, append = TRUE)
Log file for 'script_2.R' written to 'file connection'.
[ FAIL 17 | WARN 5 | SKIP 0 | PASS 170 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-sdc_descriptives.R:26:3'): sdc_descriptives works in simple cases ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_descriptives.R:26:2
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_descriptives(sdc_descriptives_DT, "id", "val_1")
5. └─sdcLog:::check_dominance(data, id_var, val_var, by)
6. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
7. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:181:3'): zeros are handles correctly ────────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-sdc_descriptives.R:181:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─testthat::expect_equal(...)
8. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
9. │ └─rlang::eval_bare(expr, quo_get_env(quo))
10. └─sdcLog::sdc_descriptives(sdc_descriptives_DT, "id", "val_2")
11. └─sdcLog:::check_dominance(data, id_var, val_var, by)
12. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
13. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:314:3'): missing ID's are handled correctly (simple case) ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-sdc_descriptives.R:314:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─testthat::expect_equal(...)
8. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
9. │ └─rlang::eval_bare(expr, quo_get_env(quo))
10. └─sdcLog::sdc_descriptives(DT_filled[seq(2, 20, 2)], "id_na", "val_1")
11. └─sdcLog:::check_dominance(data, id_var, val_var, by)
12. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
13. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:493:3'): #77 is fixed ───────────────────────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::capture_warnings(...) at test-sdc_descriptives.R:493:2
2. │ └─base::withCallingHandlers(...)
3. ├─testthat::expect_equal(...)
4. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
5. │ └─rlang::eval_bare(expr, quo_get_env(quo))
6. └─sdcLog::sdc_descriptives(df, "id", val_var = "val")
7. └─sdcLog:::check_dominance(data, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:33:5'): sdc_min_max() works in simple case ───────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:33:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(...)
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:58:5'): sdc_min_max() produces no result in case of sd_overlap due to dominance ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_extreme.R:58:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:84:5'): sdc_min_max() produces no result in case of sd_overlap ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:84:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_3")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:254:5'): sdc_min_max() does not enter an infinite loop ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:254:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt[1:5], "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Failure ('test-sdc_log.R:27:5'): sdc_log() works correctly with log files ───
readLines(tf)[-exclude] (`actual`) not identical to gsub("✓", "v", readLines(log))[-exclude] (`expected`).
actual[2:4] vs expected[2:28]
""
"> data(\"sdc_descriptives_DT\")"
""
"> sdc_descriptives(data = sdc_descriptives_DT, id_var = \"id\", val_var = \"val_1\")"
+ "-------------------------------------------------- SDC results (descriptives) --"
+ "OPTIONS: sdc.n_ids: 5 | sdc.n_ids_dominance: 2 | sdc.share_dominance: 0.85"
+ "SETTINGS: id_var: id | val_var: val_1 | zero_as_NA: FALSE"
+ "--------------------------------------------------------------------------------"
+ ""
+ "> data(\"sdc_min_max_DT\")"
+ ""
and 17 more ...
── Failure ('test-sdc_log.R:28:5'): sdc_log() works correctly with log files ───
readLines\(tf\)\[exclude\] does not match "Output complies to RDC rules.".
Actual values:
* <NA>
* <NA>
Backtrace:
▆
1. └─testthat::expect_match(readLines(tf)[exclude], "Output complies to RDC rules.") at test-sdc_log.R:28:4
2. └─testthat:::expect_match_(...)
── Failure ('test-sdc_log.R:46:5'): sdc_log() works correctly with connections ──
readLines(tf_conn)[-exclude] (`actual`) not identical to gsub("✓", "v", readLines(log))[-exclude] (`expected`).
actual[2:4] vs expected[2:28]
""
"> data(\"sdc_descriptives_DT\")"
""
"> sdc_descriptives(data = sdc_descriptives_DT, id_var = \"id\", val_var = \"val_1\")"
+ "-------------------------------------------------- SDC results (descriptives) --"
+ "OPTIONS: sdc.n_ids: 5 | sdc.n_ids_dominance: 2 | sdc.share_dominance: 0.85"
+ "SETTINGS: id_var: id | val_var: val_1 | zero_as_NA: FALSE"
+ "--------------------------------------------------------------------------------"
+ ""
+ "> data(\"sdc_min_max_DT\")"
+ ""
and 17 more ...
── Failure ('test-sdc_log.R:47:5'): sdc_log() works correctly with connections ──
readLines\(tf_conn\)\[exclude\] does not match "Output complies to RDC rules.".
Actual values:
* <NA>
* <NA>
Backtrace:
▆
1. └─testthat::expect_match(readLines(tf_conn)[exclude], "Output complies to RDC rules.") at test-sdc_log.R:47:4
2. └─testthat:::expect_match_(...)
── Error ('test-sdc_min_max.R:33:5'): sdc_min_max() works in simple case ───────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:33:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(...)
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:58:5'): sdc_min_max() produces no result in case of sd_overlap due to dominance ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_min_max.R:58:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:84:5'): sdc_min_max() produces no result in case of sd_overlap ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:84:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_3")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:261:5'): sdc_min_max() does not enter an infinite loop ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:261:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt[1:5], "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:287:5'): argument fill_id_var works ──────────────
Error in ``[.data.table`(data, i = !is.na(get(id_var)) & !is.na(get(val_var)),
j = list(distinct_ids = data.table::uniqueN(get(id_var))),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:287:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id_na", val_var = "val_1")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_distinct_ids(SD, id_var, val_var, by)
8. ├─...[]
9. └─data.table:::`[.data.table`(...)
[ FAIL 17 | WARN 5 | SKIP 0 | PASS 170 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.5.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘FAQ.Rmd’ using rmarkdown
--- finished re-building ‘FAQ.Rmd’
--- re-building ‘intro.Rmd’ using rmarkdown
Quitting from lines 115-116 [descriptives_simple] (intro.Rmd)
Error: processing vignette 'intro.Rmd' failed with diagnostics:
'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
--- failed re-building ‘intro.Rmd’
--- re-building ‘options.Rmd’ using rmarkdown
Quitting from lines 52-53 [example1_sdc.n_ids] (options.Rmd)
Error: processing vignette 'options.Rmd' failed with diagnostics:
'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
--- failed re-building ‘options.Rmd’
SUMMARY: processing the following files failed:
‘intro.Rmd’ ‘options.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64
Version: 0.5.0
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [15s/17s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(sdcLog)
>
> test_check("sdcLog")
> 1 + 1
[1] 2
> sdc_log(script_2, conn, append = TRUE)
Log file for 'script_2.R' written to 'file connection'.
[ FAIL 17 | WARN 5 | SKIP 0 | PASS 170 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-sdc_descriptives.R:26:3'): sdc_descriptives works in simple cases ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_descriptives.R:26:2
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_descriptives(sdc_descriptives_DT, "id", "val_1")
5. └─sdcLog:::check_dominance(data, id_var, val_var, by)
6. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
7. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:181:3'): zeros are handles correctly ────────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-sdc_descriptives.R:181:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─testthat::expect_equal(...)
8. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
9. │ └─rlang::eval_bare(expr, quo_get_env(quo))
10. └─sdcLog::sdc_descriptives(sdc_descriptives_DT, "id", "val_2")
11. └─sdcLog:::check_dominance(data, id_var, val_var, by)
12. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
13. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:314:3'): missing ID's are handled correctly (simple case) ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-sdc_descriptives.R:314:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─testthat::expect_equal(...)
8. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
9. │ └─rlang::eval_bare(expr, quo_get_env(quo))
10. └─sdcLog::sdc_descriptives(DT_filled[seq(2, 20, 2)], "id_na", "val_1")
11. └─sdcLog:::check_dominance(data, id_var, val_var, by)
12. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
13. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:493:3'): #77 is fixed ───────────────────────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::capture_warnings(...) at test-sdc_descriptives.R:493:2
2. │ └─base::withCallingHandlers(...)
3. ├─testthat::expect_equal(...)
4. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
5. │ └─rlang::eval_bare(expr, quo_get_env(quo))
6. └─sdcLog::sdc_descriptives(df, "id", val_var = "val")
7. └─sdcLog:::check_dominance(data, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:33:5'): sdc_min_max() works in simple case ───────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:33:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(...)
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:58:5'): sdc_min_max() produces no result in case of sd_overlap due to dominance ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_extreme.R:58:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:84:5'): sdc_min_max() produces no result in case of sd_overlap ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:84:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_3")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:254:5'): sdc_min_max() does not enter an infinite loop ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:254:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt[1:5], "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Failure ('test-sdc_log.R:27:5'): sdc_log() works correctly with log files ───
readLines(tf)[-exclude] (`actual`) not identical to gsub("✓", "v", readLines(log))[-exclude] (`expected`).
actual[2:4] vs expected[2:28]
""
"> data(\"sdc_descriptives_DT\")"
""
"> sdc_descriptives(data = sdc_descriptives_DT, id_var = \"id\", val_var = \"val_1\")"
+ "-------------------------------------------------- SDC results (descriptives) --"
+ "OPTIONS: sdc.n_ids: 5 | sdc.n_ids_dominance: 2 | sdc.share_dominance: 0.85"
+ "SETTINGS: id_var: id | val_var: val_1 | zero_as_NA: FALSE"
+ "--------------------------------------------------------------------------------"
+ ""
+ "> data(\"sdc_min_max_DT\")"
+ ""
and 17 more ...
── Failure ('test-sdc_log.R:28:5'): sdc_log() works correctly with log files ───
readLines\(tf\)\[exclude\] does not match "Output complies to RDC rules.".
Actual values:
* <NA>
* <NA>
Backtrace:
▆
1. └─testthat::expect_match(readLines(tf)[exclude], "Output complies to RDC rules.") at test-sdc_log.R:28:4
2. └─testthat:::expect_match_(...)
── Failure ('test-sdc_log.R:46:5'): sdc_log() works correctly with connections ──
readLines(tf_conn)[-exclude] (`actual`) not identical to gsub("✓", "v", readLines(log))[-exclude] (`expected`).
actual[2:4] vs expected[2:28]
""
"> data(\"sdc_descriptives_DT\")"
""
"> sdc_descriptives(data = sdc_descriptives_DT, id_var = \"id\", val_var = \"val_1\")"
+ "-------------------------------------------------- SDC results (descriptives) --"
+ "OPTIONS: sdc.n_ids: 5 | sdc.n_ids_dominance: 2 | sdc.share_dominance: 0.85"
+ "SETTINGS: id_var: id | val_var: val_1 | zero_as_NA: FALSE"
+ "--------------------------------------------------------------------------------"
+ ""
+ "> data(\"sdc_min_max_DT\")"
+ ""
and 17 more ...
── Failure ('test-sdc_log.R:47:5'): sdc_log() works correctly with connections ──
readLines\(tf_conn\)\[exclude\] does not match "Output complies to RDC rules.".
Actual values:
* <NA>
* <NA>
Backtrace:
▆
1. └─testthat::expect_match(readLines(tf_conn)[exclude], "Output complies to RDC rules.") at test-sdc_log.R:47:4
2. └─testthat:::expect_match_(...)
── Error ('test-sdc_min_max.R:33:5'): sdc_min_max() works in simple case ───────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:33:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(...)
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:58:5'): sdc_min_max() produces no result in case of sd_overlap due to dominance ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_min_max.R:58:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:84:5'): sdc_min_max() produces no result in case of sd_overlap ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:84:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_3")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:261:5'): sdc_min_max() does not enter an infinite loop ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:261:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt[1:5], "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:287:5'): argument fill_id_var works ──────────────
Error in ``[.data.table`(data, i = !is.na(get(id_var)) & !is.na(get(val_var)),
j = list(distinct_ids = data.table::uniqueN(get(id_var))),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:287:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id_na", val_var = "val_1")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_distinct_ids(SD, id_var, val_var, by)
8. ├─...[]
9. └─data.table:::`[.data.table`(...)
[ FAIL 17 | WARN 5 | SKIP 0 | PASS 170 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.5.0
Check: tests
Result: ERROR
Running 'spelling.R' [0s]
Running 'testthat.R' [9s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(sdcLog)
>
> test_check("sdcLog")
> 1 + 1
[1] 2
> sdc_log(script_2, conn, append = TRUE)
Log file for 'script_2.R' written to 'file connection'.
[ FAIL 17 | WARN 5 | SKIP 0 | PASS 170 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-sdc_descriptives.R:26:3'): sdc_descriptives works in simple cases ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_descriptives.R:26:2
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_descriptives(sdc_descriptives_DT, "id", "val_1")
5. └─sdcLog:::check_dominance(data, id_var, val_var, by)
6. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
7. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:181:3'): zeros are handles correctly ────────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_message(...) at test-sdc_descriptives.R:181:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─testthat::expect_equal(...)
8. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
9. │ └─rlang::eval_bare(expr, quo_get_env(quo))
10. └─sdcLog::sdc_descriptives(sdc_descriptives_DT, "id", "val_2")
11. └─sdcLog:::check_dominance(data, id_var, val_var, by)
12. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
13. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:314:3'): missing ID's are handled correctly (simple case) ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_warning(...) at test-sdc_descriptives.R:314:2
2. │ └─testthat:::expect_condition_matching(...)
3. │ └─testthat:::quasi_capture(...)
4. │ ├─testthat (local) .capture(...)
5. │ │ └─base::withCallingHandlers(...)
6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
7. ├─testthat::expect_equal(...)
8. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
9. │ └─rlang::eval_bare(expr, quo_get_env(quo))
10. └─sdcLog::sdc_descriptives(DT_filled[seq(2, 20, 2)], "id_na", "val_1")
11. └─sdcLog:::check_dominance(data, id_var, val_var, by)
12. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
13. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_descriptives.R:493:3'): #77 is fixed ───────────────────────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::capture_warnings(...) at test-sdc_descriptives.R:493:2
2. │ └─base::withCallingHandlers(...)
3. ├─testthat::expect_equal(...)
4. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
5. │ └─rlang::eval_bare(expr, quo_get_env(quo))
6. └─sdcLog::sdc_descriptives(df, "id", val_var = "val")
7. └─sdcLog:::check_dominance(data, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:33:5'): sdc_min_max() works in simple case ───────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:33:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(...)
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:58:5'): sdc_min_max() produces no result in case of sd_overlap due to dominance ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_extreme.R:58:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:84:5'): sdc_min_max() produces no result in case of sd_overlap ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:84:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_3")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_extreme.R:254:5'): sdc_min_max() does not enter an infinite loop ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:254:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt[1:5], "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Failure ('test-sdc_log.R:27:5'): sdc_log() works correctly with log files ───
readLines(tf)[-exclude] (`actual`) not identical to gsub("✓", "v", readLines(log))[-exclude] (`expected`).
actual[2:4] vs expected[2:28]
""
"> data(\"sdc_descriptives_DT\")"
""
"> sdc_descriptives(data = sdc_descriptives_DT, id_var = \"id\", val_var = \"val_1\")"
+ "-------------------------------------------------- SDC results (descriptives) --"
+ "OPTIONS: sdc.n_ids: 5 | sdc.n_ids_dominance: 2 | sdc.share_dominance: 0.85"
+ "SETTINGS: id_var: id | val_var: val_1 | zero_as_NA: FALSE"
+ "--------------------------------------------------------------------------------"
+ ""
+ "> data(\"sdc_min_max_DT\")"
+ ""
and 17 more ...
── Failure ('test-sdc_log.R:28:5'): sdc_log() works correctly with log files ───
readLines\(tf\)\[exclude\] does not match "Output complies to RDC rules.".
Actual values:
* <NA>
* <NA>
Backtrace:
▆
1. └─testthat::expect_match(readLines(tf)[exclude], "Output complies to RDC rules.") at test-sdc_log.R:28:4
2. └─testthat:::expect_match_(...)
── Failure ('test-sdc_log.R:46:5'): sdc_log() works correctly with connections ──
readLines(tf_conn)[-exclude] (`actual`) not identical to gsub("✓", "v", readLines(log))[-exclude] (`expected`).
actual[2:4] vs expected[2:28]
""
"> data(\"sdc_descriptives_DT\")"
""
"> sdc_descriptives(data = sdc_descriptives_DT, id_var = \"id\", val_var = \"val_1\")"
+ "-------------------------------------------------- SDC results (descriptives) --"
+ "OPTIONS: sdc.n_ids: 5 | sdc.n_ids_dominance: 2 | sdc.share_dominance: 0.85"
+ "SETTINGS: id_var: id | val_var: val_1 | zero_as_NA: FALSE"
+ "--------------------------------------------------------------------------------"
+ ""
+ "> data(\"sdc_min_max_DT\")"
+ ""
and 17 more ...
── Failure ('test-sdc_log.R:47:5'): sdc_log() works correctly with connections ──
readLines\(tf_conn\)\[exclude\] does not match "Output complies to RDC rules.".
Actual values:
* <NA>
* <NA>
Backtrace:
▆
1. └─testthat::expect_match(readLines(tf_conn)[exclude], "Output complies to RDC rules.") at test-sdc_log.R:47:4
2. └─testthat:::expect_match_(...)
── Error ('test-sdc_min_max.R:33:5'): sdc_min_max() works in simple case ───────
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:33:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(...)
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:58:5'): sdc_min_max() produces no result in case of sd_overlap due to dominance ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-sdc_min_max.R:58:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:84:5'): sdc_min_max() produces no result in case of sd_overlap ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:84:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_3")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:261:5'): sdc_min_max() does not enter an infinite loop ──
Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:261:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt[1:5], "id", "val_2")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_dominance(SD, id_var, val_var, by)
8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by]
9. └─data.table:::`[.data.table`(...)
── Error ('test-sdc_min_max.R:287:5'): argument fill_id_var works ──────────────
Error in ``[.data.table`(data, i = !is.na(get(id_var)) & !is.na(get(val_var)),
j = list(distinct_ids = data.table::uniqueN(get(id_var))),
keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too)
Backtrace:
▆
1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:287:4
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─sdcLog::sdc_min_max(extreme_test_dt, "id_na", val_var = "val_1")
5. └─sdcLog:::find_SD(...)
6. └─sdcLog:::find_SD_problems(...)
7. └─sdcLog:::check_distinct_ids(SD, id_var, val_var, by)
8. ├─...[]
9. └─data.table:::`[.data.table`(...)
[ FAIL 17 | WARN 5 | SKIP 0 | PASS 170 ]
Error: Test failures
Execution halted
Flavor: r-devel-windows-x86_64