bigstatsr: Statistical Tools for Filebacked Big Matrices

Easy-to-use, efficient, flexible and scalable statistical tools. Package bigstatsr provides and uses Filebacked Big Matrices via memory-mapping. It provides for instance matrix operations, Principal Component Analysis, sparse linear supervised models, utility functions and more <doi:10.1093/bioinformatics/bty185>.

Version: 1.3.1
Depends: R (≥ 3.3)
Imports: bigassertr (≥ 0.1.1), bigparallelr (≥ 0.2.3), cowplot, foreach, ggplot2 (≥ 3.0), graphics, methods, Rcpp, RSpectra, stats, tibble, utils
LinkingTo: Rcpp, RcppArmadillo, rmio (≥ 0.1.3)
Suggests: biglasso, bigmemory (≥ 4.5.33), bigreadr (≥ 0.2), covr, data.table, dplyr, glmnet, hexbin, memuse, ModelMetrics, RhpcBLASctl, spelling (≥ 1.2), testthat
Published: 2020-11-06
Author: Florian Privé [aut, cre], Michael Blum [ths], Hugues Aschard [ths]
Maintainer: Florian Privé <florian.prive.21 at gmail.com>
BugReports: https://github.com/privefl/bigstatsr/issues
License: GPL-3
URL: https://privefl.github.io/bigstatsr/
NeedsCompilation: yes
Language: en-US
Citation: bigstatsr citation info
Materials: README NEWS
In views: HighPerformanceComputing
CRAN checks: bigstatsr results

Downloads:

Reference manual: bigstatsr.pdf
Package source: bigstatsr_1.3.1.tar.gz
Windows binaries: r-devel: bigstatsr_1.3.1.zip, r-release: bigstatsr_1.3.1.zip, r-oldrel: bigstatsr_1.3.1.zip
macOS binaries: r-release: bigstatsr_1.3.1.tgz, r-oldrel: bigstatsr_1.3.1.tgz
Old sources: bigstatsr archive

Reverse dependencies:

Reverse depends: bigsnpr
Reverse imports: bigdist, chickn, Directional
Reverse linking to: bigsnpr, chickn

Linking:

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