disprose: Discriminating Probes Selection

Set of tools for molecular probes selection and design of a microarray, e.g. the assessment of physical and chemical properties, blast performance, selection according to sensitivity and selectivity. Methods used in package are described in: Lorenz R., Stephan H.B., Höner zu Siederdissen C. et al. (2011) <doi:10.1186/1748-7188-6-26>; Camacho C., Coulouris G., Avagyan V. et al. (2009) <doi:10.1186/1471-2105-10-421>.

Version: 0.1.3
Depends: R (≥ 3.5.0)
Suggests: BBmisc, biomartr, curl, DBI, dplyr, rentrez, reutils, RSQLite, stats, stringr, seqinr, TmCalculator, utils, XML
Published: 2022-01-06
Author: Elena Filatova ORCID iD [aut, cre], Oleg Utkin ORCID iD [ctb], Blokhina Scientific Research Institute of Epidemiology and Microbiology of Nizhny Novgorod, Russia [fnd]
Maintainer: Elena Filatova <filatova at nniiem.ru>
License: GPL-3
NeedsCompilation: no
Language: en-us
Materials: NEWS
CRAN checks: disprose results

Documentation:

Reference manual: disprose.pdf

Downloads:

Package source: disprose_0.1.3.tar.gz
Windows binaries: r-devel: disprose_0.1.3.zip, r-release: disprose_0.1.3.zip, r-oldrel: disprose_0.1.3.zip
macOS binaries: r-release (arm64): disprose_0.1.3.tgz, r-release (x86_64): disprose_0.1.3.tgz, r-oldrel: disprose_0.1.1.tgz
Old sources: disprose archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=disprose to link to this page.